J4_5V7Q_002
3D structure
- PDB id
- 5V7Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the large ribosomal subunit from Mycobacterium tuberculosis bound with a potent linezolid analog
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- CAAGG*CCGCAGCGAAAGCGAG*CGACCCAC*GUGAAUAG
- Length
- 37 nucleotides
- Bulged bases
- 5V7Q|1|A|C|757, 5V7Q|1|A|A|760
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5V7Q|1|A|C|704
5V7Q|1|A|A|705
5V7Q|1|A|A|706
5V7Q|1|A|G|707
5V7Q|1|A|G|708
*
5V7Q|1|A|C|727
5V7Q|1|A|C|728
5V7Q|1|A|G|729
5V7Q|1|A|C|730
5V7Q|1|A|A|731
5V7Q|1|A|G|732
5V7Q|1|A|C|733
5V7Q|1|A|G|734
5V7Q|1|A|A|735
5V7Q|1|A|A|736
5V7Q|1|A|A|737
5V7Q|1|A|G|738
5V7Q|1|A|C|739
5V7Q|1|A|G|740
5V7Q|1|A|A|741
5V7Q|1|A|G|742
*
5V7Q|1|A|C|754
5V7Q|1|A|G|755
5V7Q|1|A|A|756
5V7Q|1|A|C|757
5V7Q|1|A|C|758
5V7Q|1|A|C|759
5V7Q|1|A|A|760
5V7Q|1|A|C|761
*
5V7Q|1|A|G|778
5V7Q|1|A|U|779
5V7Q|1|A|G|780
5V7Q|1|A|A|781
5V7Q|1|A|A|782
5V7Q|1|A|U|783
5V7Q|1|A|A|784
5V7Q|1|A|G|785
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 3
- 50S ribosomal protein L35
- Chain E
- 50S ribosomal protein L4
- Chain L
- 50S ribosomal protein L15
Coloring options: