J4_5V7Q_004

3D structure

PDB id

5V7Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the large ribosomal subunit from Mycobacterium tuberculosis bound with a potent linezolid analog

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GGUUC*GGUGAG*CC*GCCCGUAC

Length

21 nucleotides

Bulged bases

5V7Q|1|A|G|1472

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5V7Q|1|A|G|1441
5V7Q|1|A|G|1442
5V7Q|1|A|U|1443
5V7Q|1|A|U|1444
5V7Q|1|A|C|1445
*
5V7Q|1|A|G|1469
5V7Q|1|A|G|1470
5V7Q|1|A|U|1471
5V7Q|1|A|G|1472
5V7Q|1|A|A|1473
5V7Q|1|A|G|1474
*
5V7Q|1|A|C|1535
5V7Q|1|A|C|1536
*
5V7Q|1|A|G|1832
5V7Q|1|A|C|1833
5V7Q|1|A|C|1834
5V7Q|1|A|C|1835
5V7Q|1|A|G|1836
5V7Q|1|A|U|1837
5V7Q|1|A|A|1838
5V7Q|1|A|C|1839

Current chains

Chain A

23S rRNA

Nearby chains

Chain 2

50S ribosomal protein L34

Chain T

50S ribosomal protein L23