J4_5V7Q_005

3D structure

PDB id

5V7Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the large ribosomal subunit from Mycobacterium tuberculosis bound with a potent linezolid analog

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GUAC*GGG*CAUAG*CGAAUUC

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5V7Q|1|A|G|1681
5V7Q|1|A|U|1682
5V7Q|1|A|A|1683
5V7Q|1|A|C|1684
*
5V7Q|1|A|G|1703
5V7Q|1|A|G|1704
5V7Q|1|A|G|1705
*
5V7Q|1|A|C|1764
5V7Q|1|A|A|1765
5V7Q|1|A|U|1766
5V7Q|1|A|A|1767
5V7Q|1|A|G|1768
*
5V7Q|1|A|C|1779
5V7Q|1|A|G|1780
5V7Q|1|A|A|1781
5V7Q|1|A|A|1782
5V7Q|1|A|U|1783
5V7Q|1|A|U|1784
5V7Q|1|A|C|1785

Current chains

Chain A

23S rRNA

Nearby chains