J4_5ZLU_006

3D structure

PDB id

5ZLU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosome Structure bound to ABC-F protein.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GGGUUCCUAC*GUAGGGUUAG*CUUC*GAACCCGUACC

Length

35 nucleotides

Bulged bases

5ZLU|1|V|U|1313, 5ZLU|1|V|U|1341

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5ZLU|1|V|G|1309
5ZLU|1|V|G|1310
5ZLU|1|V|G|1311
5ZLU|1|V|U|1312
5ZLU|1|V|U|1313
5ZLU|1|V|C|1314
5ZLU|1|V|C|1315
5ZLU|1|V|U|1316
5ZLU|1|V|A|1317
5ZLU|1|V|C|1318
*
5ZLU|1|V|G|1334
5ZLU|1|V|U|1335
5ZLU|1|V|A|1336
5ZLU|1|V|G|1337
5ZLU|1|V|G|1338
5ZLU|1|V|G|1339
5ZLU|1|V|U|1340
5ZLU|1|V|U|1341
5ZLU|1|V|A|1342
5ZLU|1|V|G|1343
*
5ZLU|1|V|C|1404
5ZLU|1|V|U|1405
5ZLU|1|V|U|1406
5ZLU|1|V|C|1407
*
5ZLU|1|V|G|1595
5ZLU|1|V|A|1596
5ZLU|1|V|A|1597
5ZLU|1|V|C|1598
5ZLU|1|V|C|1599
5ZLU|1|V|C|1600
5ZLU|1|V|G|1601
5ZLU|1|V|U|1602
5ZLU|1|V|A|1603
5ZLU|1|V|C|1604
5ZLU|1|V|C|1605

Current chains

Chain V

23S ribosomal RNA

Nearby chains

Chain q

50S ribosomal protein L23

Chain z

50S ribosomal protein L34