J4_5ZLU_008

3D structure

PDB id

5ZLU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosome Structure bound to ABC-F protein.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CUUGC*GCGGC*GUCCUAAGGUAG*CGAAAAG

Length

29 nucleotides

Bulged bases

5ZLU|1|V|A|1971

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5ZLU|1|V|C|1832
5ZLU|1|V|U|1833
5ZLU|1|V|U|1834
5ZLU|1|V|G|1835
5ZLU|1|V|C|1836
*
5ZLU|1|V|G|1904
5ZLU|1|V|C|1905
5ZLU|1|V|G|1906
5ZLU|1|V|G|1907
5ZLU|1|V|C|1908
*
5ZLU|1|V|G|1922
5ZLU|1|V|U|1923
5ZLU|1|V|C|1924
5ZLU|1|V|C|1925
5ZLU|1|V|U|1926
5ZLU|1|V|A|1927
5ZLU|1|V|A|1928
5ZLU|1|V|G|1929
5ZLU|1|V|G|1930
5ZLU|1|V|U|1931
5ZLU|1|V|A|1932
5ZLU|1|V|G|1933
*
5ZLU|1|V|C|1967
5ZLU|1|V|G|1968
5ZLU|1|V|A|1969
5ZLU|1|V|A|1970
5ZLU|1|V|A|1971
5ZLU|1|V|A|1972
5ZLU|1|V|G|1973

Current chains

Chain V

23S ribosomal RNA

Nearby chains

Chain DD

Transfer RNA; tRNA

Chain EE

Macrolide efflux protein

Chain G

Small subunit ribosomal RNA; SSU rRNA

Chain Z

50S ribosomal protein L2