J4_5ZLU_010

3D structure

PDB id

5ZLU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosome Structure bound to ABC-F protein.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CAAAGGU*GCCUGACUGCGAG*CGAGCAGGGG*CCGG

Length

34 nucleotides

Bulged bases

5ZLU|1|V|A|2288, 5ZLU|1|V|G|2349

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5ZLU|1|V|C|2285
5ZLU|1|V|A|2286
5ZLU|1|V|A|2287
5ZLU|1|V|A|2288
5ZLU|1|V|G|2289
5ZLU|1|V|G|2290
5ZLU|1|V|U|2291
*
5ZLU|1|V|G|2341
5ZLU|1|V|C|2342
5ZLU|1|V|C|2343
5ZLU|1|V|U|2344
5ZLU|1|V|G|2345
5ZLU|1|V|A|2346
5ZLU|1|V|C|2347
5ZLU|1|V|U|2348
5ZLU|1|V|G|2349
5ZLU|1|V|C|2350
5ZLU|1|V|G|2351
5ZLU|1|V|A|2352
5ZLU|1|V|G|2353
*
5ZLU|1|V|C|2364
5ZLU|1|V|G|2365
5ZLU|1|V|A|2366
5ZLU|1|V|G|2367
5ZLU|1|V|C|2368
5ZLU|1|V|A|2369
5ZLU|1|V|G|2370
5ZLU|1|V|G|2371
5ZLU|1|V|G|2372
5ZLU|1|V|G|2373
*
5ZLU|1|V|C|2380
5ZLU|1|V|C|2381
5ZLU|1|V|G|2382
5ZLU|1|V|G|2383

Current chains

Chain V

23S ribosomal RNA

Nearby chains

Chain AA

50S ribosomal protein L35

Chain l

50S ribosomal protein L18

Chain t

50S ribosomal protein L27

Chain y

50S ribosomal protein L33