J4_5ZLU_015

3D structure

PDB id

5ZLU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosome Structure bound to ABC-F protein.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CGAUAAA*UCGCC*GGCGCGC*GG

Length

21 nucleotides

Bulged bases

5ZLU|1|V|G|1271, 5ZLU|1|V|A|1272, 5ZLU|1|V|U|1273, 5ZLU|1|V|G|1647

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5ZLU|1|V|C|1270
5ZLU|1|V|G|1271
5ZLU|1|V|A|1272
5ZLU|1|V|U|1273
5ZLU|1|V|A|1274
5ZLU|1|V|A|1275
5ZLU|1|V|A|1276
*
5ZLU|1|V|U|1294
5ZLU|1|V|C|1295
5ZLU|1|V|G|1296
5ZLU|1|V|C|1297
5ZLU|1|V|C|1298
*
5ZLU|1|V|G|1642
5ZLU|1|V|G|1643
5ZLU|1|V|C|1644
5ZLU|1|V|G|1645
5ZLU|1|V|C|1646
5ZLU|1|V|G|1647
5ZLU|1|V|C|1648
*
5ZLU|1|V|G|2009
5ZLU|1|V|G|2010

Current chains

Chain V

23S ribosomal RNA

Nearby chains

Chain k

50S ribosomal protein L17

Chain p

50S ribosomal protein L22

Chain x

50S ribosomal protein L32