J4_6BY1_039

3D structure

PDB id

6BY1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli pH03H9 complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.94 Å

Loop

Sequence

CGAAGGU*GCUUGAC*GGU*AGG

Length

20 nucleotides

Bulged bases

6BY1|1|DA|A|2288

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6BY1|1|DA|C|2285
6BY1|1|DA|G|2286
6BY1|1|DA|A|2287
6BY1|1|DA|A|2288
6BY1|1|DA|G|2289
6BY1|1|DA|G|2290
6BY1|1|DA|U|2291
*
6BY1|1|DA|G|2341
6BY1|1|DA|C|2342
6BY1|1|DA|U|2343
6BY1|1|DA|U|2344
6BY1|1|DA|G|2345
6BY1|1|DA|A|2346
6BY1|1|DA|C|2347
*
6BY1|1|DA|G|2370
6BY1|1|DA|G|2371
6BY1|1|DA|U|2372
*
6BY1|1|DA|A|2381
6BY1|1|DA|G|2382
6BY1|1|DA|G|2383

Current chains

Chain DA

23S ribosomal RNA

Nearby chains

Chain D2

50S ribosomal protein L33

Chain D4

50S ribosomal protein L35

Chain DO

50S ribosomal protein L18

Chain DW

50S ribosomal protein L27