J4_6BZ7_006

3D structure

PDB id

6BZ7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus 70S containing 16S G299A point mutation and near-cognate ASL Leucine in A site.

Experimental method

X-RAY DIFFRACTION

Resolution

3.68 Å

Loop

Sequence

CU*GAGUAC*GGAAUCUG*UAAG

Length

20 nucleotides

Bulged bases

6BZ7|1|RA|U|405

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J4_6BZ7_006 not in the Motif Atlas

Homologous match to J4_9DFE_001

Geometric discrepancy: 0.1314

The information below is about J4_9DFE_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J4_45801.6

Basepair signature

cWW-cWW-cSS-F-tHH-cWW-cSH-tWH-F-tHS-F-cWW

Number of instances in this motif group

7

Unit IDs

6BZ7|1|RA|C|268
6BZ7|1|RA|U|269
*
6BZ7|1|RA|G|370
6BZ7|1|RA|A|371
6BZ7|1|RA|G|372
6BZ7|1|RA|U|373
6BZ7|1|RA|A|374
6BZ7|1|RA|C|375
*
6BZ7|1|RA|G|399
6BZ7|1|RA|G|400
6BZ7|1|RA|A|401
6BZ7|1|RA|A|402
6BZ7|1|RA|U|403
6BZ7|1|RA|C|404
6BZ7|1|RA|U|405
6BZ7|1|RA|G|406
*
6BZ7|1|RA|U|421
6BZ7|1|RA|A|422
6BZ7|1|RA|A|423
6BZ7|1|RA|G|424

Current chains

Chain RA

23S rRNA

Nearby chains

Chain R1

50S ribosomal protein L28

Chain RI

50S ribosomal protein L9