J4_6BZ8_005
3D structure
- PDB id
- 6BZ8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Thermus thermophilus 70S containing 16S G347U point mutation and near-cognate ASL Leucine in A site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.74 Å
Loop
- Sequence
- GUGG*CGU*AAGGUCG*CC
- Length
- 16 nucleotides
- Bulged bases
- 6BZ8|1|QW|G|46, 6BZ8|1|QW|U|48
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_6BZ8_005 not in the Motif Atlas
- Homologous match to J4_2CSX_001
- Geometric discrepancy: 0.5747
- The information below is about J4_2CSX_001
- Detailed Annotation
- tRNA junction
- Broad Annotation
- No text annotation
- Motif group
- J4_36296.3
- Basepair signature
- cWW-F-cWW-cWW-F-F-F-cWW
- Number of instances in this motif group
- 5
Unit IDs
6BZ8|1|QW|G|7
6BZ8|1|QW|U|8
6BZ8|1|QW|G|9
6BZ8|1|QW|G|10
*
6BZ8|1|QW|C|26
6BZ8|1|QW|G|27
6BZ8|1|QW|U|28
*
6BZ8|1|QW|A|44
6BZ8|1|QW|A|45
6BZ8|1|QW|G|46
6BZ8|1|QW|G|47
6BZ8|1|QW|U|48
6BZ8|1|QW|C|49
6BZ8|1|QW|G|50
*
6BZ8|1|QW|C|66
6BZ8|1|QW|C|67
Current chains
- Chain QW
- tRNA fMet
Nearby chains
- Chain QG
- 30S ribosomal protein S7
- Chain QK
- 30S ribosomal protein S11
- Chain R6
- 50S ribosomal protein L33
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