J4_6BZ8_007

3D structure

PDB id

6BZ8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus 70S containing 16S G347U point mutation and near-cognate ASL Leucine in A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.74 Å

Loop

Sequence

CGAAG*CGCC*GAG*CGUAG

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J4_6BZ8_007 not in the Motif Atlas

Homologous match to J4_7A0S_002

Geometric discrepancy: 0.095

The information below is about J4_7A0S_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J4_71729.5

Basepair signature

cWW-tSH-cHH-F-F-tHS-cWW-cWW-F-F-cWW

Number of instances in this motif group

4

Unit IDs

6BZ8|1|RA|C|297
6BZ8|1|RA|G|298
6BZ8|1|RA|A|299
6BZ8|1|RA|A|300
6BZ8|1|RA|G|301
*
6BZ8|1|RA|C|316
6BZ8|1|RA|G|317
6BZ8|1|RA|C|318
6BZ8|1|RA|C|319
*
6BZ8|1|RA|G|323
6BZ8|1|RA|A|324
6BZ8|1|RA|G|325
*
6BZ8|1|RA|C|337
6BZ8|1|RA|G|338
6BZ8|1|RA|U|339
6BZ8|1|RA|A|340
6BZ8|1|RA|G|341

Current chains

Chain RA

23S rRNA

Nearby chains

Chain RF

50S ribosomal protein L4

Chain RY

50S ribosomal protein L24