J4_6BZ8_016

3D structure

PDB id

6BZ8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus 70S containing 16S G347U point mutation and near-cognate ASL Leucine in A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.74 Å

Loop

Sequence

GAGUAACG*UC*GUAG*CC

Length

16 nucleotides

Bulged bases

6BZ8|1|XA|C|121

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J4_6BZ8_016 not in the Motif Atlas

Homologous match to J4_4LFB_001

Geometric discrepancy: 0.0816

The information below is about J4_4LFB_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J4_35578.3

Basepair signature

cWW-F-cWW-F-F-F-tHW-F-cWW-cWW

Number of instances in this motif group

2

Unit IDs

6BZ8|1|XA|G|115
6BZ8|1|XA|A|116
6BZ8|1|XA|G|117
6BZ8|1|XA|U|118
6BZ8|1|XA|A|119
6BZ8|1|XA|A|120
6BZ8|1|XA|C|121
6BZ8|1|XA|G|122
*
6BZ8|1|XA|U|239
6BZ8|1|XA|C|240
*
6BZ8|1|XA|G|286
6BZ8|1|XA|U|287
6BZ8|1|XA|A|288
6BZ8|1|XA|G|289
*
6BZ8|1|XA|C|311
6BZ8|1|XA|C|312

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XL

30S ribosomal protein S12

Chain XP

30S ribosomal protein S16

Chain XQ

30S ribosomal protein S17