J4_6BZ8_025
3D structure
- PDB id
- 6BZ8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Thermus thermophilus 70S containing 16S G347U point mutation and near-cognate ASL Leucine in A site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.74 Å
Loop
- Sequence
- UC*GGUUAG*CU*ACCCGUA
- Length
- 17 nucleotides
- Bulged bases
- 6BZ8|1|YA|U|1341
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_6BZ8_025 not in the Motif Atlas
- Homologous match to J4_9DFE_005
- Geometric discrepancy: 0.0809
- The information below is about J4_9DFE_005
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_10313.5
- Basepair signature
- cWW-cWW-tHW-F-F-F-F-F-F-cWW-cWW
- Number of instances in this motif group
- 5
Unit IDs
6BZ8|1|YA|U|1313
6BZ8|1|YA|C|1314
*
6BZ8|1|YA|G|1338
6BZ8|1|YA|G|1339
6BZ8|1|YA|U|1340
6BZ8|1|YA|U|1341
6BZ8|1|YA|A|1342
6BZ8|1|YA|G|1343
*
6BZ8|1|YA|C|1404
6BZ8|1|YA|U|1405
*
6BZ8|1|YA|A|1597
6BZ8|1|YA|C|1598
6BZ8|1|YA|C|1599
6BZ8|1|YA|C|1600
6BZ8|1|YA|G|1601
6BZ8|1|YA|U|1602
6BZ8|1|YA|A|1603
Current chains
- Chain YA
- 23S rRNA
Nearby chains
- Chain Y7
- 50S ribosomal protein L34
- Chain YX
- 50S ribosomal protein L23
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