J4_6CK4_002

3D structure

PDB id

6CK4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

G96A mutant of the PRPP riboswitch from T. mathranii bound to ppGpp

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

AGU*AG*CACAC*GAUAGGU

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6CK4|1|C|A|5
6CK4|1|C|G|6
6CK4|1|C|U|7
*
6CK4|1|C|A|55
6CK4|1|C|G|56
*
6CK4|1|C|C|73
6CK4|1|C|A|74
6CK4|1|C|C|75
6CK4|1|C|A|76
6CK4|1|C|C|77
*
6CK4|1|C|G|100
6CK4|1|C|A|101
6CK4|1|C|U|102
6CK4|1|C|A|103
6CK4|1|C|G|104
6CK4|1|C|G|105
6CK4|1|C|U|106

Current chains

Chain C

PRPP riboswitch

Nearby chains

Chain A

PRPP riboswitch