J4_6ENJ_011

3D structure

PDB id

6ENJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Polyproline-stalled ribosome in the presence of A+P site tRNA and elongation-factor P (EF-P)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GGGC*GAC*GGAAGA*UUGC

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J4_6ENJ_011 not in the Motif Atlas

Homologous match to J4_7A0S_010

Geometric discrepancy: 0.1397

The information below is about J4_7A0S_010

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J4_54165.1

Basepair signature

cWW-F-F-F-cWW-cWW-cWW-cWW-cWW-F-F

Number of instances in this motif group

1

Unit IDs

6ENJ|1|A|G|2643
6ENJ|1|A|G|2644
6ENJ|1|A|G|2645
6ENJ|1|A|C|2646
*
6ENJ|1|A|G|2674
6ENJ|1|A|A|2675
6ENJ|1|A|C|2676
*
6ENJ|1|A|G|2731
6ENJ|1|A|G|2732
6ENJ|1|A|A|2733
6ENJ|1|A|A|2734
6ENJ|1|A|G|2735
6ENJ|1|A|A|2736
*
6ENJ|1|A|U|2768
6ENJ|1|A|U|2769
6ENJ|1|A|G|2770
6ENJ|1|A|C|2771

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain D

50S ribosomal protein L3

Chain J

50S ribosomal protein L13

Chain K

50S ribosomal protein L14