J4_6ERI_003

3D structure

PDB id

6ERI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the chloroplast ribosome with chl-RRF and hibernation-promoting factor

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CUUG*CGUAG*CGAG*CAAUUG

Length

19 nucleotides

Bulged bases

6ERI|1|AA|U|613

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ERI|1|AA|C|611
6ERI|1|AA|U|612
6ERI|1|AA|U|613
6ERI|1|AA|G|614
*
6ERI|1|AA|C|636
6ERI|1|AA|G|637
6ERI|1|AA|U|638
6ERI|1|AA|A|639
6ERI|1|AA|G|640
*
6ERI|1|AA|C|647
6ERI|1|AA|G|648
6ERI|1|AA|A|649
6ERI|1|AA|G|650
*
6ERI|1|AA|C|662
6ERI|1|AA|A|663
6ERI|1|AA|A|664
6ERI|1|AA|U|665
6ERI|1|AA|U|666
6ERI|1|AA|G|667

Current chains

Chain AA

23S ribosomal RNA

Nearby chains

Chain AE

50S ribosomal protein L4, chloroplastic

Chain AL

50S ribosomal protein L15, chloroplastic

Chain Ad

50S ribosomal protein L35, chloroplastic