J4_6ERI_011

3D structure

PDB id

6ERI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the chloroplast ribosome with chl-RRF and hibernation-promoting factor

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GACC*GAC*GGAG*CAC

Length

14 nucleotides

Bulged bases

6ERI|1|AA|A|2751

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ERI|1|AA|G|2660
6ERI|1|AA|A|2661
6ERI|1|AA|C|2662
6ERI|1|AA|C|2663
*
6ERI|1|AA|G|2691
6ERI|1|AA|A|2692
6ERI|1|AA|C|2693
*
6ERI|1|AA|G|2749
6ERI|1|AA|G|2750
6ERI|1|AA|A|2751
6ERI|1|AA|G|2752
*
6ERI|1|AA|C|2787
6ERI|1|AA|A|2788
6ERI|1|AA|C|2789

Current chains

Chain AA

23S ribosomal RNA

Nearby chains

Chain AD

50S ribosomal protein L3, chloroplastic

Chain AJ

50S ribosomal protein L13, chloroplastic

Chain AK

50S ribosomal protein L14, chloroplastic