J4_6FRK_007

3D structure

PDB id

6FRK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a prehandover mammalian ribosomal SRP and SRP receptor targeting complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GG*UGUGAA*UGGAAAG*UC

Length

17 nucleotides

Bulged bases

6FRK|1|5|A|2696

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6FRK|1|5|G|2618
6FRK|1|5|G|2619
*
6FRK|1|5|U|2637
6FRK|1|5|G|2638
6FRK|1|5|U|2639
6FRK|1|5|G|2640
6FRK|1|5|A|2641
6FRK|1|5|A|2642
*
6FRK|1|5|U|2692
6FRK|1|5|G|2693
6FRK|1|5|G|2694
6FRK|1|5|A|2695
6FRK|1|5|A|2696
6FRK|1|5|A|2697
6FRK|1|5|G|2698
*
6FRK|1|5|U|2718
6FRK|1|5|C|2719

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain R

Ribosomal protein eL19

Chain U

Ribosomal protein eL22

Chain g

Ribosomal protein eL34

Chain k

Ribosomal protein eL38