J4_6FTG_006

3D structure

PDB id

6FTG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Subtomogram average of OST-containing ribosome-translocon complexes from canine rough microsomal membranes

Experimental method

ELECTRON MICROSCOPY

Resolution

9.1 Å

Loop

Sequence

GG*UGUGAA*UGGAAAG*UC

Length

17 nucleotides

Bulged bases

6FTG|1|u|A|2696

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6FTG|1|u|G|2618
6FTG|1|u|G|2619
*
6FTG|1|u|U|2637
6FTG|1|u|G|2638
6FTG|1|u|U|2639
6FTG|1|u|G|2640
6FTG|1|u|A|2641
6FTG|1|u|A|2642
*
6FTG|1|u|U|2692
6FTG|1|u|G|2693
6FTG|1|u|G|2694
6FTG|1|u|A|2695
6FTG|1|u|A|2696
6FTG|1|u|A|2697
6FTG|1|u|G|2698
*
6FTG|1|u|U|2718
6FTG|1|u|C|2719

Current chains

Chain u

28S ribosomal RNA

Nearby chains

Chain R

eL19

Chain U

eL22

Chain g

eL34

Chain k

eL38