J4_6FTG_008

3D structure

PDB id

6FTG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Subtomogram average of OST-containing ribosome-translocon complexes from canine rough microsomal membranes

Experimental method

ELECTRON MICROSCOPY

Resolution

9.1 Å

Loop

Sequence

CUG*CGG*UCUUAAGGUAG*UGAAUG

Length

23 nucleotides

Bulged bases

6FTG|1|u|U|3818

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6FTG|1|u|C|3696
6FTG|1|u|U|3697
6FTG|1|u|G|3698
*
6FTG|1|u|C|3752
6FTG|1|u|G|3753
6FTG|1|u|G|3754
*
6FTG|1|u|U|3770
6FTG|1|u|C|3771
6FTG|1|u|U|3772
6FTG|1|u|U|3773
6FTG|1|u|A|3774
6FTG|1|u|A|3775
6FTG|1|u|G|3776
6FTG|1|u|G|3777
6FTG|1|u|U|3778
6FTG|1|u|A|3779
6FTG|1|u|G|3780
*
6FTG|1|u|U|3814
6FTG|1|u|G|3815
6FTG|1|u|A|3816
6FTG|1|u|A|3817
6FTG|1|u|U|3818
6FTG|1|u|G|3819

Current chains

Chain u

28S ribosomal RNA

Nearby chains

Chain A

uL2

Chain n

60s ribosomal protein l41