J4_6FTI_012

3D structure

PDB id

6FTI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structure of the Mammalian Oligosaccharyltransferase Bound to Sec61 and the Programmed 80S Ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.2 Å

Loop

Sequence

GUAA*UC*GUG*CGCC

Length

13 nucleotides

Bulged bases

6FTI|1|u|U|4677

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6FTI|1|u|G|4587
6FTI|1|u|U|4588
6FTI|1|u|A|4589
6FTI|1|u|A|4590
*
6FTI|1|u|U|4620
6FTI|1|u|C|4621
*
6FTI|1|u|G|4676
6FTI|1|u|U|4677
6FTI|1|u|G|4678
*
6FTI|1|u|C|4712
6FTI|1|u|G|4713
6FTI|1|u|C|4714
6FTI|1|u|C|4715

Current chains

Chain u

28S rRNA

Nearby chains

Chain B

uL3

Chain O

uL13

Chain V

uL14