J4_6FXC_015

3D structure

PDB id

6FXC (explore in PDB, NAKB, or RNA 3D Hub)

Description

The cryo-EM structure of hibernating 100S ribosome dimer from pathogenic Staphylococcus aureus

Experimental method

ELECTRON MICROSCOPY

Resolution

6.76 Å

Loop

Sequence

CGAAAG*CC*GAGCG*CGG

Length

16 nucleotides

Bulged bases

6FXC|1|BA|G|1309, 6FXC|1|BA|A|1310, 6FXC|1|BA|G|1691

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6FXC|1|BA|C|1308
6FXC|1|BA|G|1309
6FXC|1|BA|A|1310
6FXC|1|BA|A|1311
6FXC|1|BA|A|1312
6FXC|1|BA|G|1313
*
6FXC|1|BA|C|1331
6FXC|1|BA|C|1332
*
6FXC|1|BA|G|1689
6FXC|1|BA|A|1690
6FXC|1|BA|G|1691
6FXC|1|BA|C|1692
6FXC|1|BA|G|1693
*
6FXC|1|BA|C|2035
6FXC|1|BA|G|2036
6FXC|1|BA|G|2037

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BL

50S ribosomal protein L17

Chain BQ

50S ribosomal protein L22

Chain BZ

50S ribosomal protein L32