J4_6FXC_019

3D structure

PDB id

6FXC (explore in PDB, NAKB, or RNA 3D Hub)

Description

The cryo-EM structure of hibernating 100S ribosome dimer from pathogenic Staphylococcus aureus

Experimental method

ELECTRON MICROSCOPY

Resolution

6.76 Å

Loop

Sequence

CAAAGG*CUUGAC*GGG*CGG

Length

18 nucleotides

Bulged bases

6FXC|1|BA|G|2409

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6FXC|1|BA|C|2312
6FXC|1|BA|A|2313
6FXC|1|BA|A|2314
6FXC|1|BA|A|2315
6FXC|1|BA|G|2316
6FXC|1|BA|G|2317
*
6FXC|1|BA|C|2369
6FXC|1|BA|U|2370
6FXC|1|BA|U|2371
6FXC|1|BA|G|2372
6FXC|1|BA|A|2373
6FXC|1|BA|C|2374
*
6FXC|1|BA|G|2397
6FXC|1|BA|G|2398
6FXC|1|BA|G|2399
*
6FXC|1|BA|C|2408
6FXC|1|BA|G|2409
6FXC|1|BA|G|2410

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain B1

50S ribosomal protein L33

Chain B3

50S ribosomal protein L35

Chain BU

50S ribosomal protein L27