J4_6FXC_021

3D structure

PDB id

6FXC (explore in PDB, NAKB, or RNA 3D Hub)

Description

The cryo-EM structure of hibernating 100S ribosome dimer from pathogenic Staphylococcus aureus

Experimental method

ELECTRON MICROSCOPY

Resolution

6.76 Å

Loop

Sequence

GAGUAACAC*GCU*AUAG*CC

Length

18 nucleotides

Bulged bases

6FXC|1|Ba|C|120

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6FXC|1|Ba|G|114
6FXC|1|Ba|A|115
6FXC|1|Ba|G|116
6FXC|1|Ba|U|117
6FXC|1|Ba|A|118
6FXC|1|Ba|A|119
6FXC|1|Ba|C|120
6FXC|1|Ba|A|121
6FXC|1|Ba|C|122
*
6FXC|1|Ba|G|246
6FXC|1|Ba|C|247
6FXC|1|Ba|U|248
*
6FXC|1|Ba|A|294
6FXC|1|Ba|U|295
6FXC|1|Ba|A|296
6FXC|1|Ba|G|297
*
6FXC|1|Ba|C|319
6FXC|1|Ba|C|320

Current chains

Chain Ba

16S ribosomal RNA

Nearby chains

Chain Bl

30S ribosomal protein S12

Chain Bp

30S ribosomal protein S16

Chain Bq

30S ribosomal protein S17