J4_6GZ4_004
3D structure
- PDB id
- 6GZ4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-2 (TI-POST-2)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GGUUC*GGUCAG*UC*GGCCGUAC
- Length
- 21 nucleotides
- Bulged bases
- 6GZ4|1|A2|C|2416
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6GZ4|1|A2|G|2385
6GZ4|1|A2|G|2386
6GZ4|1|A2|U|2387
6GZ4|1|A2|U|2388
6GZ4|1|A2|C|2389
*
6GZ4|1|A2|G|2413
6GZ4|1|A2|G|2414
6GZ4|1|A2|U|2415
6GZ4|1|A2|C|2416
6GZ4|1|A2|A|2417
6GZ4|1|A2|G|2418
*
6GZ4|1|A2|U|2517
6GZ4|1|A2|C|2518
*
6GZ4|1|A2|G|2756
6GZ4|1|A2|G|2757
6GZ4|1|A2|C|2758
6GZ4|1|A2|C|2759
6GZ4|1|A2|G|2760
6GZ4|1|A2|U|2761
6GZ4|1|A2|A|2762
6GZ4|1|A2|C|2763
Current chains
- Chain A2
- 28S ribosomal RNA
Nearby chains
- Chain A3
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain AR
- ribosomal protein eL19
- Chain AX
- ribosomal protein uL23
- Chain Ag
- ribosomal protein eL34
- Chain Ah
- ribosomal protein uL29
- Chain Aj
- ribosomal protein eL37
- Chain Ak
- ribosomal protein eL38
- Chain Al
- ribosomal protein eL39
Coloring options: