J4_6GZX_016
3D structure
- PDB id
- 6GZX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T. thermophilus hibernating 100S ribosome (ice)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.57 Å
Loop
- Sequence
- CAAAGGUCC*GGCCUGACU*AGGG*CGGG
- Length
- 26 nucleotides
- Bulged bases
- 6GZX|1|A2|A|2302, 6GZX|1|A2|G|2396
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6GZX|1|A2|C|2299
6GZX|1|A2|A|2300
6GZX|1|A2|A|2301
6GZX|1|A2|A|2302
6GZX|1|A2|G|2303
6GZX|1|A2|G|2304
6GZX|1|A2|U|2305
6GZX|1|A2|C|2306
6GZX|1|A2|C|2307
*
6GZX|1|A2|G|2354
6GZX|1|A2|G|2355
6GZX|1|A2|C|2356
6GZX|1|A2|C|2357
6GZX|1|A2|U|2358
6GZX|1|A2|G|2359
6GZX|1|A2|A|2360
6GZX|1|A2|C|2361
6GZX|1|A2|U|2362
*
6GZX|1|A2|A|2383
6GZX|1|A2|G|2384
6GZX|1|A2|G|2385
6GZX|1|A2|G|2386
*
6GZX|1|A2|C|2395
6GZX|1|A2|G|2396
6GZX|1|A2|G|2397
6GZX|1|A2|G|2398
Current chains
- Chain A2
- 23S ribosomal RNA
Nearby chains
- Chain B2
- 5S ribosomal RNA; 5S rRNA
- Chain F2
- 50S ribosomal protein L5
- Chain N2
- 50S ribosomal protein L18
- Chain V2
- 50S ribosomal protein L27
- Chain b2
- 50S ribosomal protein L33
- Chain d2
- 50S ribosomal protein L35
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