J4_6GZX_017

3D structure

PDB id

6GZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (ice)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.57 Å

Loop

Sequence

GGGGC*GAC*GGAAG*CGCC

Length

17 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZX|1|A2|G|2656
6GZX|1|A2|G|2657
6GZX|1|A2|G|2658
6GZX|1|A2|G|2659
6GZX|1|A2|C|2660
*
6GZX|1|A2|G|2688
6GZX|1|A2|A|2689
6GZX|1|A2|C|2690
*
6GZX|1|A2|G|2746
6GZX|1|A2|G|2747
6GZX|1|A2|A|2748
6GZX|1|A2|A|2749
6GZX|1|A2|G|2750
*
6GZX|1|A2|C|2784
6GZX|1|A2|G|2785
6GZX|1|A2|C|2786
6GZX|1|A2|C|2787

Current chains

Chain A2

23S ribosomal RNA

Nearby chains

Chain D2

50S ribosomal protein L3

Chain I2

50S ribosomal protein L13

Chain J2

50S ribosomal protein L14