Loop J4_6GZZ

3D structure

PDB id: 6GZZ (explore in PDB, NAKB, or RNA 3D Hub)
Description: T. thermophilus hibernating 100S ribosome (amc)
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.13 Å

Loop

Sequence: UCGGACACCGAAUCCCCAGCCUAGCCGAAG*CGCC*GAG*CGUAGGCGAAAGGUGGGGGGAUAGGUGA
Length: 65 nucleotides
Bulged bases: 6GZZ|1|A2|A|308, 6GZZ|1|A2|C|311
QA status: Valid loop

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

6GZZ|1|A2|U|297
6GZZ|1|A2|C|298
6GZZ|1|A2|G|299
6GZZ|1|A2|G|300
6GZZ|1|A2|A|301
6GZZ|1|A2|C|302
6GZZ|1|A2|A|303
6GZZ|1|A2|C|304
6GZZ|1|A2|C|305
6GZZ|1|A2|G|306
6GZZ|1|A2|A|307
6GZZ|1|A2|A|308
6GZZ|1|A2|U|309
6GZZ|1|A2|C|310
6GZZ|1|A2|C|311
6GZZ|1|A2|C|312
6GZZ|1|A2|C|313
6GZZ|1|A2|A|314
6GZZ|1|A2|G|315
6GZZ|1|A2|C|316
6GZZ|1|A2|C|317
6GZZ|1|A2|U|318
6GZZ|1|A2|A|319
6GZZ|1|A2|G|320
6GZZ|1|A2|C|321
6GZZ|1|A2|C|322
6GZZ|1|A2|G|323
6GZZ|1|A2|A|324
6GZZ|1|A2|A|325
6GZZ|1|A2|G|326
*
6GZZ|1|A2|C|341
6GZZ|1|A2|G|342
6GZZ|1|A2|C|343
6GZZ|1|A2|C|344
*
6GZZ|1|A2|G|348
6GZZ|1|A2|A|349
6GZZ|1|A2|G|350
*
6GZZ|1|A2|C|362
6GZZ|1|A2|G|363
6GZZ|1|A2|U|364
6GZZ|1|A2|A|365
6GZZ|1|A2|G|366
6GZZ|1|A2|G|367
6GZZ|1|A2|C|368
6GZZ|1|A2|G|369
6GZZ|1|A2|A|370
6GZZ|1|A2|A|371
6GZZ|1|A2|A|372
6GZZ|1|A2|G|373
6GZZ|1|A2|G|374
6GZZ|1|A2|U|375
6GZZ|1|A2|G|376
6GZZ|1|A2|G|377
6GZZ|1|A2|G|378
6GZZ|1|A2|G|379
6GZZ|1|A2|G|380
6GZZ|1|A2|G|381
6GZZ|1|A2|A|382
6GZZ|1|A2|U|383
6GZZ|1|A2|A|384
6GZZ|1|A2|G|385
6GZZ|1|A2|G|386
6GZZ|1|A2|U|387
6GZZ|1|A2|G|388
6GZZ|1|A2|A|389

Current chains

Chain A2: 23S ribosomal RNA

Nearby chains

Chain E2: 50S ribosomal protein L4
Chain T2: 50S ribosomal protein L24

J4_6GZZ_005