J4_6GZZ_009
3D structure
- PDB id
- 6GZZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T. thermophilus hibernating 100S ribosome (amc)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.13 Å
Loop
- Sequence
- CAAG*CGGACGGGUG*CACAG*CACUCCUACGGGAGGCAG
- Length
- 37 nucleotides
- Bulged bases
- 6GZZ|1|A3|A|60, 6GZZ|1|A3|G|101, 6GZZ|1|A3|A|102, 6GZZ|1|A3|A|339
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6GZZ|1|A3|C|58
6GZZ|1|A3|A|59
6GZZ|1|A3|A|60
6GZZ|1|A3|G|61
*
6GZZ|1|A3|C|99
6GZZ|1|A3|G|100
6GZZ|1|A3|G|101
6GZZ|1|A3|A|102
6GZZ|1|A3|C|103
6GZZ|1|A3|G|104
6GZZ|1|A3|G|105
6GZZ|1|A3|G|106
6GZZ|1|A3|U|107
6GZZ|1|A3|G|108
*
6GZZ|1|A3|C|307
6GZZ|1|A3|A|308
6GZZ|1|A3|C|309
6GZZ|1|A3|A|310
6GZZ|1|A3|G|311
*
6GZZ|1|A3|C|332
6GZZ|1|A3|A|333
6GZZ|1|A3|C|334
6GZZ|1|A3|U|335
6GZZ|1|A3|C|336
6GZZ|1|A3|C|337
6GZZ|1|A3|U|338
6GZZ|1|A3|A|339
6GZZ|1|A3|C|340
6GZZ|1|A3|G|341
6GZZ|1|A3|G|342
6GZZ|1|A3|G|343
6GZZ|1|A3|A|344
6GZZ|1|A3|G|345
6GZZ|1|A3|G|346
6GZZ|1|A3|C|347
6GZZ|1|A3|A|348
6GZZ|1|A3|G|349
Current chains
- Chain A3
- 16S ribosomal RNA
Nearby chains
- Chain J1
- 50S ribosomal protein L14
- Chain O1
- 50S ribosomal protein L19
- Chain P3
- 30S ribosomal protein S16
- Chain T3
- 30S ribosomal protein S20
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