3D structure

PDB id
6GZZ (explore in PDB, NAKB, or RNA 3D Hub)
Description
T. thermophilus hibernating 100S ribosome (amc)
Experimental method
ELECTRON MICROSCOPY
Resolution
4.13 Å

Loop

Sequence
UAGCCGAAG*CGCC*GAG*CGUAGGCGAAA
Length
27 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6GZZ|1|A2|U|318
6GZZ|1|A2|A|319
6GZZ|1|A2|G|320
6GZZ|1|A2|C|321
6GZZ|1|A2|C|322
6GZZ|1|A2|G|323
6GZZ|1|A2|A|324
6GZZ|1|A2|A|325
6GZZ|1|A2|G|326
*
6GZZ|1|A2|C|341
6GZZ|1|A2|G|342
6GZZ|1|A2|C|343
6GZZ|1|A2|C|344
*
6GZZ|1|A2|G|348
6GZZ|1|A2|A|349
6GZZ|1|A2|G|350
*
6GZZ|1|A2|C|362
6GZZ|1|A2|G|363
6GZZ|1|A2|U|364
6GZZ|1|A2|A|365
6GZZ|1|A2|G|366
6GZZ|1|A2|G|367
6GZZ|1|A2|C|368
6GZZ|1|A2|G|369
6GZZ|1|A2|A|370
6GZZ|1|A2|A|371
6GZZ|1|A2|A|372

Current chains

Chain A2
23S ribosomal RNA

Nearby chains

Chain E2
50S ribosomal protein L4
Chain T2
50S ribosomal protein L24

Coloring options:

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