3D structure

PDB id
6GZZ (explore in PDB, NAKB, or RNA 3D Hub)
Description
T. thermophilus hibernating 100S ribosome (amc)
Experimental method
ELECTRON MICROSCOPY
Resolution
4.13 Å

Loop

Sequence
GGGCUCU*AGGGAC*GGAAG*CGC
Length
21 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6GZZ|1|A2|G|2657
6GZZ|1|A2|G|2658
6GZZ|1|A2|G|2659
6GZZ|1|A2|C|2660
6GZZ|1|A2|U|2661
6GZZ|1|A2|C|2662
6GZZ|1|A2|U|2663
*
6GZZ|1|A2|A|2685
6GZZ|1|A2|G|2686
6GZZ|1|A2|G|2687
6GZZ|1|A2|G|2688
6GZZ|1|A2|A|2689
6GZZ|1|A2|C|2690
*
6GZZ|1|A2|G|2746
6GZZ|1|A2|G|2747
6GZZ|1|A2|A|2748
6GZZ|1|A2|A|2749
6GZZ|1|A2|G|2750
*
6GZZ|1|A2|C|2784
6GZZ|1|A2|G|2785
6GZZ|1|A2|C|2786

Current chains

Chain A2
23S ribosomal RNA

Nearby chains

Chain D2
50S ribosomal protein L3
Chain I2
50S ribosomal protein L13
Chain J2
50S ribosomal protein L14

Coloring options:

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