J4_6HCJ_007
3D structure
- PDB id
- 6HCJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the rabbit 80S ribosome on globin mRNA in the rotated state with A/P and P/E tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GGG*UUGUGAAGGGCAG*CGUGCCUUGGAAAGCGUCG*CGGCGUC
- Length
- 42 nucleotides
- Bulged bases
- 6HCJ|1|51|U|2687, 6HCJ|1|51|A|2696
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6HCJ|1|51|G|2618
6HCJ|1|51|G|2619
6HCJ|1|51|G|2620
*
6HCJ|1|51|U|2636
6HCJ|1|51|U|2637
6HCJ|1|51|G|2638
6HCJ|1|51|U|2639
6HCJ|1|51|G|2640
6HCJ|1|51|A|2641
6HCJ|1|51|A|2642
6HCJ|1|51|G|2643
6HCJ|1|51|G|2644
6HCJ|1|51|G|2645
6HCJ|1|51|C|2646
6HCJ|1|51|A|2647
6HCJ|1|51|G|2648
*
6HCJ|1|51|C|2685
6HCJ|1|51|G|2686
6HCJ|1|51|U|2687
6HCJ|1|51|G|2688
6HCJ|1|51|C|2689
6HCJ|1|51|C|2690
6HCJ|1|51|U|2691
6HCJ|1|51|U|2692
6HCJ|1|51|G|2693
6HCJ|1|51|G|2694
6HCJ|1|51|A|2695
6HCJ|1|51|A|2696
6HCJ|1|51|A|2697
6HCJ|1|51|G|2698
6HCJ|1|51|C|2699
6HCJ|1|51|G|2700
6HCJ|1|51|U|2701
6HCJ|1|51|C|2702
6HCJ|1|51|G|2703
*
6HCJ|1|51|C|2713
6HCJ|1|51|G|2714
6HCJ|1|51|G|2715
6HCJ|1|51|C|2716
6HCJ|1|51|G|2717
6HCJ|1|51|U|2718
6HCJ|1|51|C|2719
Current chains
- Chain 51
- 28S ribosomal RNA
Nearby chains
- Chain R3
- eL19
- Chain U3
- eL22
- Chain g3
- eL34
- Chain k3
- eL38
Coloring options: