3D structure

PDB id
6HCM (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the rabbit collided di-ribosome (stalled monosome)
Experimental method
ELECTRON MICROSCOPY
Resolution
6.8 Å

Loop

Sequence
GUAAUC*GUUC*GUG*CGCC
Length
17 nucleotides
Bulged bases
6HCM|1|52|U|4677
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6HCM|1|52|G|4587
6HCM|1|52|U|4588
6HCM|1|52|A|4589
6HCM|1|52|A|4590
6HCM|1|52|U|4591
6HCM|1|52|C|4592
*
6HCM|1|52|G|4618
6HCM|1|52|U|4619
6HCM|1|52|U|4620
6HCM|1|52|C|4621
*
6HCM|1|52|G|4676
6HCM|1|52|U|4677
6HCM|1|52|G|4678
*
6HCM|1|52|C|4712
6HCM|1|52|G|4713
6HCM|1|52|C|4714
6HCM|1|52|C|4715

Current chains

Chain 52
28S ribosomal RNA

Nearby chains

Chain B3
uL3
Chain O3
uL13
Chain V3
Ribosomal protein L23

Coloring options:

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