J4_6HCM_015
3D structure
- PDB id
- 6HCM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the rabbit collided di-ribosome (stalled monosome)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.8 Å
Loop
- Sequence
- GUAG*CGUUCG*CGAAAGGUCC*GC
- Length
- 22 nucleotides
- Bulged bases
- 6HCM|1|23|U|47, 6HCM|1|23|C|48
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6HCM|1|23|G|7
6HCM|1|23|U|8
6HCM|1|23|A|9
6HCM|1|23|G|10
*
6HCM|1|23|C|25
6HCM|1|23|G|26
6HCM|1|23|U|27
6HCM|1|23|U|28
6HCM|1|23|C|29
6HCM|1|23|G|30
*
6HCM|1|23|C|40
6HCM|1|23|G|41
6HCM|1|23|A|42
6HCM|1|23|A|43
6HCM|1|23|A|44
6HCM|1|23|G|45
6HCM|1|23|G|46
6HCM|1|23|U|47
6HCM|1|23|C|48
6HCM|1|23|C|49
*
6HCM|1|23|G|65
6HCM|1|23|C|66
Current chains
- Chain 23
- P-site tRNA
Nearby chains
- Chain 52
- Large subunit ribosomal RNA; LSU rRNA
- Chain A1
- Small subunit ribosomal RNA; SSU rRNA
- Chain I3
- 60S ribosomal protein L10
- Chain j1
- eRF1(AAQ)
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