J4_6HCM_016
3D structure
- PDB id
- 6HCM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the rabbit collided di-ribosome (stalled monosome)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.8 Å
Loop
- Sequence
- CC*GAGGGAG*UGCGCCGCGCUCU*GAGCGCACGGGG
- Length
- 34 nucleotides
- Bulged bases
- 6HCM|1|52|G|959, 6HCM|1|52|C|972, 6HCM|1|52|C|1280
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6HCM|1|52|C|712
6HCM|1|52|C|713
*
6HCM|1|52|G|955
6HCM|1|52|A|956
6HCM|1|52|G|957
6HCM|1|52|G|958
6HCM|1|52|G|959
6HCM|1|52|A|960
6HCM|1|52|G|961
*
6HCM|1|52|U|971
6HCM|1|52|G|971|||A
6HCM|1|52|C|972
6HCM|1|52|G|973
6HCM|1|52|C|974
6HCM|1|52|C|975
6HCM|1|52|G|976
6HCM|1|52|C|977
6HCM|1|52|G|978
6HCM|1|52|C|979
6HCM|1|52|U|980
6HCM|1|52|C|981
6HCM|1|52|U|982
*
6HCM|1|52|G|1273
6HCM|1|52|A|1274
6HCM|1|52|G|1275
6HCM|1|52|C|1276
6HCM|1|52|G|1277
6HCM|1|52|C|1278
6HCM|1|52|A|1279
6HCM|1|52|C|1280
6HCM|1|52|G|1281
6HCM|1|52|G|1282
6HCM|1|52|G|1283
6HCM|1|52|G|1284
Current chains
- Chain 52
- 28S ribosomal RNA
Nearby chains
- Chain C3
- uL4
- Chain E3
- 60S ribosomal protein L6
- Chain F3
- uL30
- Chain b3
- eL29
- Chain e3
- eL32
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