J4_6HCM_022
3D structure
- PDB id
- 6HCM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the rabbit collided di-ribosome (stalled monosome)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.8 Å
Loop
- Sequence
- GACUG*CAAAGC*GUGAUU*AUGAAC
- Length
- 23 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6HCM|1|52|G|3634
6HCM|1|52|A|3635
6HCM|1|52|C|3636
6HCM|1|52|U|3637
6HCM|1|52|G|3638
*
6HCM|1|52|C|3650
6HCM|1|52|A|3651
6HCM|1|52|A|3652
6HCM|1|52|A|3653
6HCM|1|52|G|3654
6HCM|1|52|C|3655
*
6HCM|1|52|G|3689
6HCM|1|52|U|3690
6HCM|1|52|G|3691
6HCM|1|52|A|3692
6HCM|1|52|U|3693
6HCM|1|52|U|3694
*
6HCM|1|52|A|3821
6HCM|1|52|U|3822
6HCM|1|52|G|3823
6HCM|1|52|A|3824
6HCM|1|52|A|3825
6HCM|1|52|C|3826
Current chains
- Chain 52
- 28S ribosomal RNA
Nearby chains
- Chain A1
- Small subunit ribosomal RNA; SSU rRNA
- Chain A3
- Ribosomal protein L8
- Chain n3
- eL41
- Chain p3
- eL43
Coloring options: