J4_6HCQ_003
3D structure
- PDB id
- 6HCQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the rabbit collided di-ribosome (collided monosome)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.5 Å
Loop
- Sequence
- CGUGCGCGAGUC*GGCGCAAUGAAGGUGAAGGCC*GGCCGAGGUGGGAUCCCGAGGCCUUCCAGUCCGCCGAGGGCGCACCACCGGCCCGUC*GUGGAGCACGAGCGCACG
- Length
- 108 nucleotides
- Bulged bases
- 6HCQ|1|51|A|1497, 6HCQ|1|51|C|1501
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6HCQ|1|51|C|1346
6HCQ|1|51|G|1347
6HCQ|1|51|U|1348
6HCQ|1|51|G|1349
6HCQ|1|51|C|1350
6HCQ|1|51|G|1351
6HCQ|1|51|C|1352
6HCQ|1|51|G|1353
6HCQ|1|51|A|1354
6HCQ|1|51|G|1355
6HCQ|1|51|U|1356
6HCQ|1|51|C|1357
*
6HCQ|1|51|G|1382
6HCQ|1|51|G|1383
6HCQ|1|51|C|1384
6HCQ|1|51|G|1385
6HCQ|1|51|C|1386
6HCQ|1|51|A|1387
6HCQ|1|51|A|1388
6HCQ|1|51|U|1389
6HCQ|1|51|G|1390
6HCQ|1|51|A|1391
6HCQ|1|51|A|1392
6HCQ|1|51|G|1393
6HCQ|1|51|G|1394
6HCQ|1|51|U|1395
6HCQ|1|51|G|1396
6HCQ|1|51|A|1397
6HCQ|1|51|A|1398
6HCQ|1|51|G|1399
6HCQ|1|51|G|1400
6HCQ|1|51|C|1401
6HCQ|1|51|C|1402
*
6HCQ|1|51|G|1415
6HCQ|1|51|G|1416
6HCQ|1|51|C|1417
6HCQ|1|51|C|1418
6HCQ|1|51|G|1419
6HCQ|1|51|A|1420
6HCQ|1|51|G|1421
6HCQ|1|51|G|1422
6HCQ|1|51|U|1423
6HCQ|1|51|G|1424
6HCQ|1|51|G|1425
6HCQ|1|51|G|1426
6HCQ|1|51|A|1427
6HCQ|1|51|U|1428
6HCQ|1|51|C|1429
6HCQ|1|51|C|1430
6HCQ|1|51|C|1431
6HCQ|1|51|G|1432
6HCQ|1|51|A|1433
6HCQ|1|51|G|1434
6HCQ|1|51|G|1435
6HCQ|1|51|C|1436
6HCQ|1|51|C|1437
6HCQ|1|51|U|1438
6HCQ|1|51|U|1440
6HCQ|1|51|C|1441
6HCQ|1|51|C|1442
6HCQ|1|51|A|1443
6HCQ|1|51|G|1444
6HCQ|1|51|U|1445
6HCQ|1|51|C|1446
6HCQ|1|51|C|1447
6HCQ|1|51|G|1448
6HCQ|1|51|C|1449
6HCQ|1|51|C|1450
6HCQ|1|51|G|1451
6HCQ|1|51|A|1452
6HCQ|1|51|G|1453
6HCQ|1|51|G|1454
6HCQ|1|51|G|1455
6HCQ|1|51|C|1456
6HCQ|1|51|G|1457
6HCQ|1|51|C|1458
6HCQ|1|51|A|1459
6HCQ|1|51|C|1460
6HCQ|1|51|C|1461
6HCQ|1|51|A|1462
6HCQ|1|51|C|1463
6HCQ|1|51|C|1464
6HCQ|1|51|G|1465
6HCQ|1|51|G|1466
6HCQ|1|51|C|1467
6HCQ|1|51|C|1468
6HCQ|1|51|C|1469
6HCQ|1|51|G|1470
6HCQ|1|51|U|1471
6HCQ|1|51|C|1472
*
6HCQ|1|51|G|1493
6HCQ|1|51|U|1494
6HCQ|1|51|G|1495
6HCQ|1|51|G|1496
6HCQ|1|51|A|1497
6HCQ|1|51|G|1498
6HCQ|1|51|C|1499
6HCQ|1|51|A|1500
6HCQ|1|51|C|1501
6HCQ|1|51|G|1502
6HCQ|1|51|A|1503
6HCQ|1|51|G|1504
6HCQ|1|51|C|1505
6HCQ|1|51|G|1506
6HCQ|1|51|C|1507
6HCQ|1|51|A|1508
6HCQ|1|51|C|1509
6HCQ|1|51|G|1510
Current chains
- Chain 51
- 28S ribosomal RNA
Nearby chains
- Chain C3
- uL4
- Chain F3
- uL30
- Chain L3
- eL13
- Chain N3
- Ribosomal protein L15
- Chain Q3
- eL18
- Chain a3
- uL15
- Chain b3
- eL29
- Chain i3
- 60S ribosomal protein L36
Coloring options: