Loop J4_6HTQ

3D structure

PDB id: 6HTQ (explore in PDB, NAKB, or RNA 3D Hub)
Description: Stringent response control by a bifunctional RelA enzyme in the presence and absence of the ribosome
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.5 Å

Loop

Sequence: CCAAAC*GGGUUGUA*UGAGUACGGCGGAACACGUGAAAUUCCGUCGGAAUCCG*CAAG
Length: 56 nucleotides
Bulged bases: 6HTQ|1|A|U|301, 6HTQ|1|A|G|419, 6HTQ|1|A|G|433, 6HTQ|1|A|G|446, 6HTQ|1|A|G|447, 6HTQ|1|A|C|452
QA status: Valid loop

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

6HTQ|1|A|C|271
6HTQ|1|A|C|272
6HTQ|1|A|A|273
6HTQ|1|A|A|274
6HTQ|1|A|A|275
6HTQ|1|A|C|276
*
6HTQ|1|A|G|295
6HTQ|1|A|G|296
6HTQ|1|A|G|297
6HTQ|1|A|U|298
6HTQ|1|A|U|299
6HTQ|1|A|G|300
6HTQ|1|A|U|301
6HTQ|1|A|A|302
*
6HTQ|1|A|U|416
6HTQ|1|A|G|417
6HTQ|1|A|A|418
6HTQ|1|A|G|419
6HTQ|1|A|U|420
6HTQ|1|A|A|421
6HTQ|1|A|C|422
6HTQ|1|A|G|423
6HTQ|1|A|G|424
6HTQ|1|A|C|425
6HTQ|1|A|G|426
6HTQ|1|A|G|427
6HTQ|1|A|A|428
6HTQ|1|A|A|429
6HTQ|1|A|C|430
6HTQ|1|A|A|431
6HTQ|1|A|C|432
6HTQ|1|A|G|433
6HTQ|1|A|U|434
6HTQ|1|A|G|435
6HTQ|1|A|A|436
6HTQ|1|A|A|437
6HTQ|1|A|A|438
6HTQ|1|A|U|439
6HTQ|1|A|U|440
6HTQ|1|A|C|441
6HTQ|1|A|C|442
6HTQ|1|A|G|443
6HTQ|1|A|U|444
6HTQ|1|A|C|445
6HTQ|1|A|G|446
6HTQ|1|A|G|447
6HTQ|1|A|A|448
6HTQ|1|A|A|449
6HTQ|1|A|U|450
6HTQ|1|A|C|451
6HTQ|1|A|C|452
6HTQ|1|A|G|453
*
6HTQ|1|A|C|468
6HTQ|1|A|A|469
6HTQ|1|A|A|470
6HTQ|1|A|G|471

Current chains

Chain A: 23S ribosomal RNA

Nearby chains

Chain W: 50S ribosomal protein L28

J4_6HTQ_002