J4_6HTQ_008

3D structure

PDB id

6HTQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Stringent response control by a bifunctional RelA enzyme in the presence and absence of the ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.5 Å

Loop

Sequence

AGGCGACUG*CACAGG*CUGACG*CGCAACGAUCU

Length

32 nucleotides

Bulged bases

6HTQ|1|A|A|2010

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HTQ|1|A|A|1797
6HTQ|1|A|G|1798
6HTQ|1|A|G|1799
6HTQ|1|A|C|1800
6HTQ|1|A|G|1801
6HTQ|1|A|A|1802
6HTQ|1|A|C|1803
6HTQ|1|A|U|1804
6HTQ|1|A|G|1805
*
6HTQ|1|A|C|1817
6HTQ|1|A|A|1818
6HTQ|1|A|C|1819
6HTQ|1|A|A|1820
6HTQ|1|A|G|1821
6HTQ|1|A|G|1822
*
6HTQ|1|A|C|1855
6HTQ|1|A|U|1856
6HTQ|1|A|G|1857
6HTQ|1|A|A|1858
6HTQ|1|A|C|1859
6HTQ|1|A|G|1860
*
6HTQ|1|A|C|2003
6HTQ|1|A|G|2004
6HTQ|1|A|C|2005
6HTQ|1|A|A|2006
6HTQ|1|A|A|2007
6HTQ|1|A|C|2008
6HTQ|1|A|G|2009
6HTQ|1|A|A|2010
6HTQ|1|A|U|2011
6HTQ|1|A|C|2012
6HTQ|1|A|U|2013

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain C

50S ribosomal protein L2

Chain a

Small subunit ribosomal RNA; SSU rRNA