J4_6HTQ_011

3D structure

PDB id

6HTQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Stringent response control by a bifunctional RelA enzyme in the presence and absence of the ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.5 Å

Loop

Sequence

AGGAGC*GACGCAC*GUGCGGACG*CCCCU

Length

27 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HTQ|1|A|A|2670
6HTQ|1|A|G|2671
6HTQ|1|A|G|2672
6HTQ|1|A|A|2673
6HTQ|1|A|G|2674
6HTQ|1|A|C|2675
*
6HTQ|1|A|G|2703
6HTQ|1|A|A|2704
6HTQ|1|A|C|2705
6HTQ|1|A|G|2706
6HTQ|1|A|C|2707
6HTQ|1|A|A|2708
6HTQ|1|A|C|2709
*
6HTQ|1|A|G|2756
6HTQ|1|A|U|2757
6HTQ|1|A|G|2758
6HTQ|1|A|C|2759
6HTQ|1|A|G|2760
6HTQ|1|A|G|2761
6HTQ|1|A|A|2762
6HTQ|1|A|C|2763
6HTQ|1|A|G|2764
*
6HTQ|1|A|C|2798
6HTQ|1|A|C|2799
6HTQ|1|A|C|2800
6HTQ|1|A|C|2801
6HTQ|1|A|U|2802

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain D

50S ribosomal protein L3

Chain J

50S ribosomal protein L13

Chain K

50S ribosomal protein L14