J4_6HTQ_012

3D structure

PDB id

6HTQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Stringent response control by a bifunctional RelA enzyme in the presence and absence of the ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.5 Å

Loop

Sequence

GAGUAACAC*GGCG*CGUAG*CC

Length

20 nucleotides

Bulged bases

6HTQ|1|a|C|119

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HTQ|1|a|G|113
6HTQ|1|a|A|114
6HTQ|1|a|G|115
6HTQ|1|a|U|116
6HTQ|1|a|A|117
6HTQ|1|a|A|118
6HTQ|1|a|C|119
6HTQ|1|a|A|120
6HTQ|1|a|C|121
*
6HTQ|1|a|G|246
6HTQ|1|a|G|247
6HTQ|1|a|C|248
6HTQ|1|a|G|249
*
6HTQ|1|a|C|293
6HTQ|1|a|G|294
6HTQ|1|a|U|295
6HTQ|1|a|A|296
6HTQ|1|a|G|297
*
6HTQ|1|a|C|319
6HTQ|1|a|C|320

Current chains

Chain a

16S rRNA

Nearby chains

Chain l

30S ribosomal protein S12

Chain p

30S ribosomal protein S16

Chain q

30S ribosomal protein S17