J4_6HTQ_013

3D structure

PDB id

6HTQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Stringent response control by a bifunctional RelA enzyme in the presence and absence of the ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.5 Å

Loop

Sequence

GAC*GAUGGUU*AUAAAAG*CAC

Length

20 nucleotides

Bulged bases

6HTQ|1|a|G|181, 6HTQ|1|a|A|211

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HTQ|1|a|G|141
6HTQ|1|a|A|142
6HTQ|1|a|C|143
*
6HTQ|1|a|G|177
6HTQ|1|a|A|178
6HTQ|1|a|U|179
6HTQ|1|a|G|180
6HTQ|1|a|G|181
6HTQ|1|a|U|182
6HTQ|1|a|U|183
*
6HTQ|1|a|A|206
6HTQ|1|a|U|207
6HTQ|1|a|A|208
6HTQ|1|a|A|209
6HTQ|1|a|A|210
6HTQ|1|a|A|211
6HTQ|1|a|G|212
*
6HTQ|1|a|C|227
6HTQ|1|a|A|228
6HTQ|1|a|C|229

Current chains

Chain a

16S rRNA

Nearby chains

Chain p

30S ribosomal protein S16

Chain t

30S ribosomal protein S20