J4_6HTQ_014
3D structure
- PDB id
- 6HTQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Stringent response control by a bifunctional RelA enzyme in the presence and absence of the ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.5 Å
Loop
- Sequence
- CGUAAAGGG*CGAAAG*CCGUAAACGAUGAG*CUCCG
- Length
- 34 nucleotides
- Bulged bases
- 6HTQ|1|a|A|581, 6HTQ|1|a|G|585, 6HTQ|1|a|A|824
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6HTQ|1|a|C|578
6HTQ|1|a|G|579
6HTQ|1|a|U|580
6HTQ|1|a|A|581
6HTQ|1|a|A|582
6HTQ|1|a|A|583
6HTQ|1|a|G|584
6HTQ|1|a|G|585
6HTQ|1|a|G|586
*
6HTQ|1|a|C|773
6HTQ|1|a|G|774
6HTQ|1|a|A|775
6HTQ|1|a|A|776
6HTQ|1|a|A|777
6HTQ|1|a|G|778
*
6HTQ|1|a|C|819
6HTQ|1|a|C|820
6HTQ|1|a|G|821
6HTQ|1|a|U|822
6HTQ|1|a|A|823
6HTQ|1|a|A|824
6HTQ|1|a|A|825
6HTQ|1|a|C|826
6HTQ|1|a|G|827
6HTQ|1|a|A|828
6HTQ|1|a|U|829
6HTQ|1|a|G|830
6HTQ|1|a|A|831
6HTQ|1|a|G|832
*
6HTQ|1|a|C|887
6HTQ|1|a|U|888
6HTQ|1|a|C|889
6HTQ|1|a|C|890
6HTQ|1|a|G|891
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain e
- 30S ribosomal protein S5
- Chain h
- 30S ribosomal protein S8
- Chain l
- 30S ribosomal protein S12
- Chain o
- 30S ribosomal protein S15
- Chain q
- 30S ribosomal protein S17
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