J4_6HTQ_022
3D structure
- PDB id
- 6HTQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Stringent response control by a bifunctional RelA enzyme in the presence and absence of the ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.5 Å
Loop
- Sequence
- CUG*CG*CCUAAGGUAGCGAAAUUCCUUG*CCCGCACGAAAG
- Length
- 39 nucleotides
- Bulged bases
- 6HTQ|1|A|A|1967, 6HTQ|1|A|U|1973, 6HTQ|1|A|C|1992, 6HTQ|1|A|A|2000
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6HTQ|1|A|C|1862
6HTQ|1|A|U|1863
6HTQ|1|A|G|1864
*
6HTQ|1|A|C|1934
6HTQ|1|A|G|1935
*
6HTQ|1|A|C|1953
6HTQ|1|A|C|1954
6HTQ|1|A|U|1955
6HTQ|1|A|A|1956
6HTQ|1|A|A|1957
6HTQ|1|A|G|1958
6HTQ|1|A|G|1959
6HTQ|1|A|U|1960
6HTQ|1|A|A|1961
6HTQ|1|A|G|1962
6HTQ|1|A|C|1963
6HTQ|1|A|G|1964
6HTQ|1|A|A|1965
6HTQ|1|A|A|1966
6HTQ|1|A|A|1967
6HTQ|1|A|U|1968
6HTQ|1|A|U|1969
6HTQ|1|A|C|1970
6HTQ|1|A|C|1971
6HTQ|1|A|U|1972
6HTQ|1|A|U|1973
6HTQ|1|A|G|1974
*
6HTQ|1|A|C|1990
6HTQ|1|A|C|1991
6HTQ|1|A|C|1992
6HTQ|1|A|G|1993
6HTQ|1|A|C|1994
6HTQ|1|A|A|1995
6HTQ|1|A|C|1996
6HTQ|1|A|G|1997
6HTQ|1|A|A|1998
6HTQ|1|A|A|1999
6HTQ|1|A|A|2000
6HTQ|1|A|G|2001
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain C
- 50S ribosomal protein L2
- Chain a
- Small subunit ribosomal RNA; SSU rRNA
- Chain v
- Transfer RNA; tRNA
Coloring options: