J4_6I7V_036

3D structure

PDB id

6I7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosomal protein paralogs bL31 and bL36

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

GGGC*GAC*GGAAG*UGC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J4_6I7V_036 not in the Motif Atlas

Homologous match to J4_5J7L_028

Geometric discrepancy: 0.1376

The information below is about J4_5J7L_028

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J4_77044.4

Basepair signature

cWW-F-tHS-F-cWW-cWW-cWW-F-cWW

Number of instances in this motif group

3

Unit IDs

6I7V|1|CA|G|2643
6I7V|1|CA|G|2644
6I7V|1|CA|G|2645
6I7V|1|CA|C|2646
*
6I7V|1|CA|G|2674
6I7V|1|CA|A|2675
6I7V|1|CA|C|2676
*
6I7V|1|CA|G|2731
6I7V|1|CA|G|2732
6I7V|1|CA|A|2733
6I7V|1|CA|A|2734
6I7V|1|CA|G|2735
*
6I7V|1|CA|U|2769
6I7V|1|CA|G|2770
6I7V|1|CA|C|2771

Current chains

Chain CA

23S ribsomal RNA

Nearby chains

Chain CD

50S ribosomal protein L3

Chain CK

50S ribosomal protein L13

Chain CL

50S ribosomal protein L14