J4_6MTC_012

3D structure

PDB id

6MTC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome with Z-site tRNA and IFRD2 (unrotated state)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GUAA*(OMU)C*GUG*CGCC

Length

13 nucleotides

Bulged bases

6MTC|1|5|U|4677

QA status

Modified nucleotides: OMU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6MTC|1|5|G|4587
6MTC|1|5|U|4588
6MTC|1|5|A|4589
6MTC|1|5|A|4590
*
6MTC|1|5|OMU|4620
6MTC|1|5|C|4621
*
6MTC|1|5|G|4676
6MTC|1|5|U|4677
6MTC|1|5|G|4678
*
6MTC|1|5|C|4712
6MTC|1|5|G|4713
6MTC|1|5|C|4714
6MTC|1|5|C|4715

Current chains

Chain 5

28S rRNA

Nearby chains

Chain B

60S ribosomal protein L3

Chain O

60S ribosomal protein L13a

Chain V

60S ribosomal protein L23