J4_6MTE_003

3D structure

PDB id

6MTE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome with eEF2 and SERBP1 (rotated state)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

(OMC)AAAUAU*AGG*CAUGUU*AG

Length

18 nucleotides

Bulged bases

6MTE|1|5|A|2366, 6MTE|1|5|U|2369, 6MTE|1|5|U|2828

QA status

Modified nucleotides: OMC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6MTE|1|5|OMC|2365
6MTE|1|5|A|2366
6MTE|1|5|A|2367
6MTE|1|5|A|2368
6MTE|1|5|U|2369
6MTE|1|5|A|2370
6MTE|1|5|U|2371
*
6MTE|1|5|A|2389
6MTE|1|5|G|2390
6MTE|1|5|G|2391
*
6MTE|1|5|C|2824
6MTE|1|5|A|2825
6MTE|1|5|U|2826
6MTE|1|5|G|2827
6MTE|1|5|U|2828
6MTE|1|5|U|2829
*
6MTE|1|5|A|3856
6MTE|1|5|G|3857

Current chains

Chain 5

28S rRNA

Nearby chains

Chain P

uL22

Chain R

eL19

Chain d

eL31