J4_6MTE_010

3D structure

PDB id

6MTE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome with eEF2 and SERBP1 (rotated state)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GUAA*(OMU)C*GUG*CGCC

Length

13 nucleotides

Bulged bases

6MTE|1|5|U|4677

QA status

Modified nucleotides: OMU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6MTE|1|5|G|4587
6MTE|1|5|U|4588
6MTE|1|5|A|4589
6MTE|1|5|A|4590
*
6MTE|1|5|OMU|4620
6MTE|1|5|C|4621
*
6MTE|1|5|G|4676
6MTE|1|5|U|4677
6MTE|1|5|G|4678
*
6MTE|1|5|C|4712
6MTE|1|5|G|4713
6MTE|1|5|C|4714
6MTE|1|5|C|4715

Current chains

Chain 5

28S rRNA

Nearby chains

Chain B

uL3

Chain O

uL13

Chain V

uL14