J4_6N1D_019
3D structure
- PDB id
- 6N1D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- X-ray Crystal complex showing Spontaneous Ribosomal Translocation of mRNA and tRNAs into a Chimeric Hybrid State
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- CUAAAC*GGGUCG*CUG*UAAG
- Length
- 19 nucleotides
- Bulged bases
- 6N1D|1|B23S|C|271|||A, 6N1D|1|B23S|U|405
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6N1D|1|B23S|C|268
6N1D|1|B23S|U|269
6N1D|1|B23S|A|270
6N1D|1|B23S|A|270|||A
6N1D|1|B23S|A|270|||B
6N1D|1|B23S|C|270|||C
*
6N1D|1|B23S|G|270|||W
6N1D|1|B23S|G|270|||X
6N1D|1|B23S|G|270|||Y
6N1D|1|B23S|U|270|||Z
6N1D|1|B23S|C|271|||A
6N1D|1|B23S|G|271|||B
*
6N1D|1|B23S|C|404
6N1D|1|B23S|U|405
6N1D|1|B23S|G|406
*
6N1D|1|B23S|U|421
6N1D|1|B23S|A|422
6N1D|1|B23S|A|423
6N1D|1|B23S|G|424
Current chains
- Chain B23S
- 23S rRNA
Nearby chains
- Chain BL09
- 50S ribosomal protein L9
- Chain BL28
- 50S ribosomal protein L28
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