J4_6N8J_005
3D structure
- PDB id
- 6N8J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of late nuclear (LN) pre-60S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- GG*CUUAAC*GGAAGAG*UC
- Length
- 17 nucleotides
- Bulged bases
- 6N8J|1|1|G|1751
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6N8J|1|1|G|1674
6N8J|1|1|G|1675
*
6N8J|1|1|C|1693
6N8J|1|1|U|1694
6N8J|1|1|U|1695
6N8J|1|1|A|1696
6N8J|1|1|A|1697
6N8J|1|1|C|1698
*
6N8J|1|1|G|1747
6N8J|1|1|G|1748
6N8J|1|1|A|1749
6N8J|1|1|A|1750
6N8J|1|1|G|1751
6N8J|1|1|A|1752
6N8J|1|1|G|1753
*
6N8J|1|1|U|1772
6N8J|1|1|C|1773
Current chains
- Chain 1
- Saccharomyces cerevisiae S288C 35S pre-ribosomal RNA (RDN37-1), miscRNA
Nearby chains
- Chain U
- 60S ribosomal protein L22-A
- Chain g
- 60S ribosomal protein L34-A
- Chain k
- 60S ribosomal protein L38
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